{"id":40,"date":"2022-12-08T14:03:29","date_gmt":"2022-12-08T14:03:29","guid":{"rendered":"https:\/\/comp-chem-lab.de\/?page_id=40"},"modified":"2025-03-12T13:47:04","modified_gmt":"2025-03-12T13:47:04","slug":"faq","status":"publish","type":"page","link":"https:\/\/comp-chem-lab.de\/en\/faq\/","title":{"rendered":"background"},"content":{"rendered":"<div data-elementor-type=\"wp-page\" data-elementor-id=\"40\" class=\"elementor elementor-40\" data-elementor-post-type=\"page\">\n\t\t\t\t\t\t<section class=\"elementor-section elementor-top-section elementor-element elementor-element-a58798c elementor-section-boxed elementor-section-height-default elementor-section-height-default\" data-id=\"a58798c\" data-element_type=\"section\" data-e-type=\"section\" data-settings=\"{&quot;background_background&quot;:&quot;classic&quot;}\">\n\t\t\t\t\t\t<div class=\"elementor-container elementor-column-gap-default\">\n\t\t\t\t\t<div class=\"elementor-column elementor-col-100 elementor-top-column elementor-element elementor-element-60c4082\" data-id=\"60c4082\" data-element_type=\"column\" data-e-type=\"column\">\n\t\t\t<div class=\"elementor-widget-wrap elementor-element-populated\">\n\t\t\t\t\t\t<div class=\"elementor-element elementor-element-5f33cce elementor-widget elementor-widget-heading\" data-id=\"5f33cce\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h1 class=\"elementor-heading-title elementor-size-default\">Theoretical Background<\/h1>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-a763c34 elementor-widget elementor-widget-accordion\" data-id=\"a763c34\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"accordion.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"elementor-accordion\">\n\t\t\t\t\t\t\t<div class=\"elementor-accordion-item\">\n\t\t\t\t\t<div id=\"elementor-tab-title-1751\" class=\"elementor-tab-title\" data-tab=\"1\" role=\"button\" aria-controls=\"elementor-tab-content-1751\" aria-expanded=\"false\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon elementor-accordion-icon-left\" aria-hidden=\"true\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-closed\"><i class=\"fas fa-plus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-opened\"><i class=\"fas fa-minus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t<a class=\"elementor-accordion-title\" tabindex=\"0\">What are quantum chemical experiments?<\/a>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t<div id=\"elementor-tab-content-1751\" class=\"elementor-tab-content elementor-clearfix\" data-tab=\"1\" role=\"region\" aria-labelledby=\"elementor-tab-title-1751\"><p class=\"p1\">Erwin Schr\u00f6dinger postulated a very important tool to calculate energies of all kinds of chemical compounds in 1926 - the so called Schr\u00f6dinger equation.<\/p>\n<p class=\"p2\" style=\"text-align: center;\"><em>\u0124 \u03a8 = E \u03a8<\/em><\/p>\n<p class=\"p3\" style=\"font-size: small;\">mit <em>E<\/em>: energy; <em>\u03a8<\/em>: wave function, <em>\u0124<\/em>: Hamilton operator (combination of calculations on potential and kinetic energy of a particle)<\/p>\n<p class=\"p1\">Nevertheless, scientists had to determine the energy of chemical compounds and reactions by conducting effortful experiments. Why? You can only get an exact solution of the Schr\u00f6dinger equation when it is applied to the hydrogen atom. For any larger systems, numerical (approximating) methods are needed, which is extremely cumbersome. Therefore, computer with high computing capacities had to be invented. Today, it is even possible to predict the structures of complex proteins and the products of chemical reactions based on quantum chemical calculations. Experiments can not only be conducted in the laboratory but also by using computers. Since computer chips mainly consist of silicon, experiments that are conducted with computers are called <i>in silico<\/i> experiments.<\/p>\n<p><img fetchpriority=\"high\" decoding=\"async\" class=\"size-medium wp-image-187 aligncenter\" src=\"https:\/\/comp-chem-lab.de\/wp-content\/uploads\/2022\/12\/erwin-schroedinger-300x300.jpg\" alt=\"\" width=\"300\" height=\"300\" srcset=\"https:\/\/comp-chem-lab.de\/wp-content\/uploads\/2022\/12\/erwin-schroedinger-300x300.jpg 300w, https:\/\/comp-chem-lab.de\/wp-content\/uploads\/2022\/12\/erwin-schroedinger-150x150.jpg 150w, https:\/\/comp-chem-lab.de\/wp-content\/uploads\/2022\/12\/erwin-schroedinger.jpg 497w\" sizes=\"(max-width: 300px) 100vw, 300px\" \/><\/p>\n<p style=\"text-align: center;\"><em>Erwin Schr\u00f6dinger<\/em><\/p><\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t<div class=\"elementor-accordion-item\">\n\t\t\t\t\t<div id=\"elementor-tab-title-1752\" class=\"elementor-tab-title\" data-tab=\"2\" role=\"button\" aria-controls=\"elementor-tab-content-1752\" aria-expanded=\"false\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon elementor-accordion-icon-left\" aria-hidden=\"true\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-closed\"><i class=\"fas fa-plus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-opened\"><i class=\"fas fa-minus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t<a class=\"elementor-accordion-title\" tabindex=\"0\">I want to know more: How do I calculate the energy of different structures?<\/a>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t<div id=\"elementor-tab-content-1752\" class=\"elementor-tab-content elementor-clearfix\" data-tab=\"2\" role=\"region\" aria-labelledby=\"elementor-tab-title-1752\"><p>To get a first idea of the way computer chemical methods work, we need to take a closer look at the Schr\u00f6dinger equation:<\/p><p style=\"text-align: center;\"><em>\u0124 \u03a8 = E \u03a8<\/em><\/p><p>E stands for the energy which is to be calculated and\u00a0 <em>\u03a8 <\/em>represents the so called wave function. The Hamilton operator corresponds to the energy of the whole system. To simplify the equation, one assumes that the nuclei of the atoms are more or less immobile (Born-Oppenheimer approximation). The Hamilton operator then includes the following parameters:<\/p><ul><li>kinetic energy of the electrons<\/li><li>potential energy due to electromagnetic (Coulomb) interactions between the negatively charged electrons and the positively charged nuclei<\/li><li>potential energy due to electromagnetic electron-electron interaction<\/li><\/ul><p>Especially the third parameter is extremely difficult to calculate, since it depends on the position of the electrons. For the ethene molecule, one would need to solve a differential equation of 48 dimensions. Computerchemical methods simplify this calculation by using several approximations. To get a first overview of the different methods, take a look at <a href=\"http:\/\/doi.org\/10.1021\/jacs.2c13042\">Simons (2023).<\/a><\/p><\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t<div class=\"elementor-accordion-item\">\n\t\t\t\t\t<div id=\"elementor-tab-title-1753\" class=\"elementor-tab-title\" data-tab=\"3\" role=\"button\" aria-controls=\"elementor-tab-content-1753\" aria-expanded=\"false\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon elementor-accordion-icon-left\" aria-hidden=\"true\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-closed\"><i class=\"fas fa-plus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-opened\"><i class=\"fas fa-minus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t<a class=\"elementor-accordion-title\" tabindex=\"0\">Why do the experimental values slightly differ from the calculated values?<\/a>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t<div id=\"elementor-tab-content-1753\" class=\"elementor-tab-content elementor-clearfix\" data-tab=\"3\" role=\"region\" aria-labelledby=\"elementor-tab-title-1753\"><p>As mentioned above, computerchemical methods are based on\u00a0<em>approximated<\/em> solutions of the Schr\u00f6dinger equation. The quality of the solutions differs depending on the chosen method.\u00a0<\/p><p>Nowadays, there are approximating methods such as  the <em>coupled cluster<\/em> theory which produce nearly exact energetic values. The required computing power increases immensely with the increasing accuracy of the results. Thus, the challenge of computer chemical calculations is to find a balance between accuracy and calculation costs.<\/p><\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t<div class=\"elementor-accordion-item\">\n\t\t\t\t\t<div id=\"elementor-tab-title-1754\" class=\"elementor-tab-title\" data-tab=\"4\" role=\"button\" aria-controls=\"elementor-tab-content-1754\" aria-expanded=\"false\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon elementor-accordion-icon-left\" aria-hidden=\"true\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-closed\"><i class=\"fas fa-plus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-opened\"><i class=\"fas fa-minus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t<a class=\"elementor-accordion-title\" tabindex=\"0\">Which software is used for the calculation?<\/a>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t<div id=\"elementor-tab-content-1754\" class=\"elementor-tab-content elementor-clearfix\" data-tab=\"4\" role=\"region\" aria-labelledby=\"elementor-tab-title-1754\"><p class=\"p1\">All calculations are based on ORCA, a quantum chemical program, which was developed by Prof. Frank Neese at the Max-Planck institute for coal research. ORCA is used in scientific research to calculate chemical structures and their properties. Furthermore, it can be used to verify reaction paths. For academic purposes, the usage of the program is free of charge. Further information on the installation of the program can be found on the <a href=\"http:\/\/www.orcasoftware.de\/tutorials_orca\">ORCA homepage<\/a> .<\/p><p><img decoding=\"async\" class=\"alignnone wp-image-1565 size-medium\" src=\"https:\/\/comp-chem-lab.de\/wp-content\/uploads\/2023\/06\/orca_logo_grey-300x193.png\" alt=\"\" width=\"300\" height=\"193\" srcset=\"https:\/\/comp-chem-lab.de\/wp-content\/uploads\/2023\/06\/orca_logo_grey-300x193.png 300w, https:\/\/comp-chem-lab.de\/wp-content\/uploads\/2023\/06\/orca_logo_grey-1024x660.png 1024w, https:\/\/comp-chem-lab.de\/wp-content\/uploads\/2023\/06\/orca_logo_grey-768x495.png 768w, https:\/\/comp-chem-lab.de\/wp-content\/uploads\/2023\/06\/orca_logo_grey-18x12.png 18w, https:\/\/comp-chem-lab.de\/wp-content\/uploads\/2023\/06\/orca_logo_grey.png 1084w\" sizes=\"(max-width: 300px) 100vw, 300px\" \/><\/p><\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t<div class=\"elementor-accordion-item\">\n\t\t\t\t\t<div id=\"elementor-tab-title-1755\" class=\"elementor-tab-title\" data-tab=\"5\" role=\"button\" aria-controls=\"elementor-tab-content-1755\" aria-expanded=\"false\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon elementor-accordion-icon-left\" aria-hidden=\"true\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-closed\"><i class=\"fas fa-plus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-opened\"><i class=\"fas fa-minus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t<a class=\"elementor-accordion-title\" tabindex=\"0\">Do scientists really use quantum chemical methods in their research?<\/a>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t<div id=\"elementor-tab-content-1755\" class=\"elementor-tab-content elementor-clearfix\" data-tab=\"5\" role=\"region\" aria-labelledby=\"elementor-tab-title-1755\"><p>Yes, they do! It is true, of course, that experiments with real chemicals in the laboratory are still crucial in the scientific research process. Nevertheless, many scientific journals also publish theoretical, thus quantum chemical, results. The usage of these methods has led to a better understanding of chemical correlations. They can also be used to predict outcomes of chemical reactions and therefore help to improve the planning process of syntheses. Nowadays, the development of ever improving computer chemical methods is an important field of research in Theoretical Chemistry.<\/p><p>For future research, the combination of computer chemical methods with artificial intelligence is very promising. Therefore, the journal\u00a0<em>Science<\/em> has awarded\u00a0<em>Breakthrough of the Year 2021<\/em> to the clarification of protein structures.<\/p><p><iframe title=\"YouTube video player\" src=\"https:\/\/www.youtube.com\/embed\/iUMpm3tYsVE?start=215\" width=\"560\" height=\"315\" frameborder=\"0\" allowfullscreen=\"allowfullscreen\"><\/iframe><\/p><\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t<div class=\"elementor-accordion-item\">\n\t\t\t\t\t<div id=\"elementor-tab-title-1756\" class=\"elementor-tab-title\" data-tab=\"6\" role=\"button\" aria-controls=\"elementor-tab-content-1756\" aria-expanded=\"false\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon elementor-accordion-icon-left\" aria-hidden=\"true\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-closed\"><i class=\"fas fa-plus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-opened\"><i class=\"fas fa-minus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t<a class=\"elementor-accordion-title\" tabindex=\"0\">How can I learn more about the idea of the Comp-Chem-Lab?<\/a>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t<div id=\"elementor-tab-content-1756\" class=\"elementor-tab-content elementor-clearfix\" data-tab=\"6\" role=\"region\" aria-labelledby=\"elementor-tab-title-1756\"><p class=\"p1\">Insight into the research for the development and on the use of the Comp-Chem-Lab are given in <a href=\"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.jchemed.4c01136\">P\u00f6lloth (2025)<\/a> .<\/p><p class=\"p1\">A general overview of quantum chemical calculations and how they work can be found in the work of <a href=\"https:\/\/doi.org\/10.1021\/jacs.8b13313\">Neese <em>et al.<\/em> (2019).<\/a><\/p><p><a href=\"https:\/\/doi.org\/10.1039\/D2SC02535C\">Seeman und Tantillo (2022)<\/a> present many examples which show how quantum chemical experiments have influenced the acquisition of chemical knowledge.<\/p><p>The computer chemical experiments on this website aim to deepen the understanding of students concerning the interdependencies of energy and structures. They are based on the empirical results from <a href=\"https:\/\/doi.org\/10.1039\/D3RP00068K\">P\u00f6lloth et al. (2023)<\/a>.<\/p><\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t<div class=\"elementor-accordion-item\">\n\t\t\t\t\t<div id=\"elementor-tab-title-1757\" class=\"elementor-tab-title\" data-tab=\"7\" role=\"button\" aria-controls=\"elementor-tab-content-1757\" aria-expanded=\"false\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon elementor-accordion-icon-left\" aria-hidden=\"true\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-closed\"><i class=\"fas fa-plus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t<span class=\"elementor-accordion-icon-opened\"><i class=\"fas fa-minus\"><\/i><\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t\t\t\t<a class=\"elementor-accordion-title\" tabindex=\"0\">How can I learn to use ORCA on my own?<\/a>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t<div id=\"elementor-tab-content-1757\" class=\"elementor-tab-content elementor-clearfix\" data-tab=\"7\" role=\"region\" aria-labelledby=\"elementor-tab-title-1757\"><p>ORCA can be installed and used for scientific inquiry free of charge. Detailed information can be found in the <a href=\"https:\/\/www.faccts.de\/docs\/orca\/6.0\/manual\/\">Manual<\/a> and in the <a href=\"https:\/\/www.faccts.de\/docs\/orca\/6.0\/tutorials\/\">Tutorials<\/a> .<\/p><\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t<\/section>\n\t\t\t\t<\/div>","protected":false},"excerpt":{"rendered":"<p>Theoretischer Hintergrund Was sind eigentlich quantenchemische Experimente? Viele Jahrzehnte war es nur \u00fcber sehr aufw\u00e4ndige Experimente m\u00f6glich, die Energie von chemischen Strukturen und Reaktionen zu bestimmen. Dabei stellte Erwin Schr\u00f6dinger schon 1926 die nach ihm benannte Schr\u00f6dinger-Gleichung auf, mit der sich theoretisch die Energie aller chemischen Verbindungen berechnen l\u00e4sst: \u0124 \u03a8 = E \u03a8 mit [&hellip;]<\/p>\n","protected":false},"author":2,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"inline_featured_image":false,"footnotes":""},"class_list":["post-40","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/comp-chem-lab.de\/en\/wp-json\/wp\/v2\/pages\/40","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/comp-chem-lab.de\/en\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/comp-chem-lab.de\/en\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/comp-chem-lab.de\/en\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/comp-chem-lab.de\/en\/wp-json\/wp\/v2\/comments?post=40"}],"version-history":[{"count":93,"href":"https:\/\/comp-chem-lab.de\/en\/wp-json\/wp\/v2\/pages\/40\/revisions"}],"predecessor-version":[{"id":2431,"href":"https:\/\/comp-chem-lab.de\/en\/wp-json\/wp\/v2\/pages\/40\/revisions\/2431"}],"wp:attachment":[{"href":"https:\/\/comp-chem-lab.de\/en\/wp-json\/wp\/v2\/media?parent=40"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}